CDGD - Cardiac Developmental Gene Database

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The Mouse Cardiac Developmental Gene Database is a resource that provides cardiac development association predictions for all mouse genes. The predictions generated in this project, based on large numbers of gene features, are obtained through a machine learning classification tool.
 
Trulli
Image of normal heart development
Trulli
Image of an abnormal heart
Trulli
Histological analysis of the developing heart at E14.5. VS = ventricular septum; LA = left atria (LA); Scale bar =20 µm
 
Search Genes by ID
  • Enter a list of gene identifiers one per line
    • An example for searching genes by Gene Name - Cdc45
    • An example for searching genes by Ensembl ID - ENSMUSG00000000028
    • An example for searching genes by MGI ID - MGI:1338073
    • An example for searching genes by UniProt ID - Q9Z1X9

  • Search results can be downladed as a CSV file from the "Download File" link

Search for Genes
  • Searching for known and predicted cardiac and non-cardiac genes
  • The phenotype of a knockout mouse was defined as known 'cardiac' if the gene was known to be involved in cardiac development
  • Mouse knockouts with phenotypes known not to be associated with cardiac development were marked as 'non-cardiac'
  • Known cardiac and non-cardiac genes were used as training datasets in model development
  • Search results can be downladed as a CSV file from the "Download File" link
Known Cardiac Genes
Cardiac Reporter Genes
Predicted Cardiac Genes
All Cardiac Genes (Known, Reporter and Predicted)
Known Non-cardiac Genes
Predicted Non-cardiac Genes
All Non-cardiac Genes (Known and Predicted)
Predicted Genes
Search for Genes and their Cardiac Status by Mouse Chromosome
  • Searching for genes located on a Chromosome
  • We used the Ensembl release 103 dataset of mouse genes (GRCm39)
    to annotate gene locations


Cardiac Genes Non-cardiac Genes All Genes

Region Start (bp)
Region End (bp)